Friday, 28 July 2017
Sunday, 5 March 2017
There is currently a problem with the SLiMFinder webserver hosted at UCD, where masking is failing to be performed, regardless of settings. This severely impacts the quality of results. (Disorder, low complexity and n-terminal methionine masking are generally recommended for SLiMFinder.)
I am in communication with the Shields lab to try and get the issue fixed but, until it has been rectified, the bioware.ucd.ie SLiMFinder webserver should not be used.
Friday, 27 January 2017
SLiMSuite species codes are designed to follow the UniprotKB organism (species) identification codes,
using them wherever possible. They form part of the standard
gene_SPECIES__AccNum naming convention for sequences within
SLiMSuite. Species codes should be upper case, and unique for each species.