Open source bioinformatics for Short Linear Motif (SLiM), molecular evolution and genomics sequence analysis.
Monday, 20 August 2012
Minor bug in CompariMotif 3.6 download
The recent fixing up of the server has highlighted a couple of bugs that have crept in during the upgrading of CompariMotif to handle complex motifs better. (More on this in a later post.) The problem is restricted to lower case motifs, so stick to upper case and all will be well. It will be fixed in the next release. A replacement rje_slimlist.py file is available on request if anyone needs to fix it urgently. (This also features replacement of "?" characters with "{0,1}" so these motifs are no longer rejected.)
Labels:
bugs,
CompariMotif,
downloads
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