How to Cite SLiMSuite programs

Most programs in the SLiMSuite package have citation instructions in their docstring. Either run with the help or help option (or if running through SLiMSuite or SeqSuite, use help=T) to bring up that information. Alternatively, the online documentation should show the papers to cite.

You can retrieve documentation for a given program by replacing slimsuite in the box below and clicking View Documentation.

for:

If a program does not have its own citation, please cite SLiMSuite using: Edwards RJ & Palopoli N (2015): Computational Prediction of Short Linear Motifs from Protein Sequences. Methods Mol Biol. 1268:89-141.

For general use or reuse of code, please cite the Zenodo DOI for the GitHub release:

External programs

See External Components of SLiMSuite for citing programs that SLiMSuite uses.